Wim Pomp
19c17a798d
- python: remove deprecated shape argument
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- rust: make frame argument to save more generic
2024-10-17 13:45:32 +02:00
Wim Pomp
76046b762e
- try to use array views
2024-10-16 22:14:11 +02:00
Wim Pomp
9ed901a11a
- fix writing pixel size
2024-10-16 17:48:58 +02:00
Wim Pomp
48b4a2c7ba
- commit before upload to crates.io
2024-10-16 17:16:58 +02:00
Wim Pomp
eea72dfba9
- parallel bugfix
2024-10-16 17:03:32 +02:00
Wim Pomp
abd94ee3be
- workflows
2024-10-16 16:31:38 +02:00
Wim Pomp
81635b366b
- workflows
2024-10-16 16:25:31 +02:00
Wim Pomp
9423a2f0fa
- workflows
2024-10-16 16:09:40 +02:00
Wim Pomp
8b4e020bb0
- workflows
2024-10-16 16:04:25 +02:00
Wim Pomp
e07e636423
- workflows
2024-10-16 15:59:04 +02:00
Wim Pomp
d21e5ba499
- workflows
2024-10-16 15:49:44 +02:00
Wim Pomp
8b618b8f8a
- workflows
2024-10-16 15:49:21 +02:00
Wim Pomp
f44506966e
- workflows
2024-10-16 15:43:05 +02:00
Wim Pomp
13df6f21f2
- workflows
2024-10-16 15:41:54 +02:00
Wim Pomp
54babd106f
- workflows
2024-10-16 15:40:33 +02:00
Wim Pomp
2fad446566
- workflows
2024-10-16 15:39:55 +02:00
Wim Pomp
d7b2ae24ca
- workflows
2024-10-16 15:29:42 +02:00
Wim Pomp
f33509e404
- workflows
2024-10-16 15:20:24 +02:00
Wim Pomp
b4986fc353
- workflows
2024-10-16 15:08:05 +02:00
Wim Pomp
dc0c3d62aa
- workflows
2024-10-16 15:00:20 +02:00
Wim Pomp
3d464312ce
- workflows
2024-10-16 14:48:50 +02:00
Wim Pomp
539cb94059
Merge branch 'rs'
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# Conflicts:
# tiffwrite/__init__.py
2024-10-16 14:41:53 +02:00
Wim Pomp
80de0cbe96
- empty commit before merge
2024-10-16 14:41:28 +02:00
Wim Pomp
4451ad7c61
- change publish.yml
2024-10-16 14:36:21 +02:00
Wim Pomp
83c0e221fb
- special IJTiffParallel class to help generate frames in parallel
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- warning now shows which frames are missing
2024-10-16 14:26:30 +02:00
Wim Pomp
654755ab83
- switch black and white at ends of quantitative colormaps
2024-10-14 19:03:24 +02:00
Wim Pomp
140e7eaf38
- use HashSet for storing tags in ifd
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- make offset and count tags short or long if possible
2024-10-13 15:52:52 +02:00
Wim Pomp
95a49bb28e
- bump ndarray
2024-10-12 13:30:11 +02:00
Wim Pomp
625b222a0d
- some warnings
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- better color(map) support
- make python module optional in rust
- max 48 threads
2024-10-12 13:19:22 +02:00
Wim Pomp
4d31933a38
- make zstd block include content size so fiji can actually read it
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- add compression level argument
- remove shape argument
- some more pytest tests
2024-10-11 18:52:49 +02:00
Wim Pomp
1197806a6f
- start some color(map) support in python
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- compress_frame function in python for backwards compatibility
- save all extra tags in a single hashmap
- construct tags from references
- store frames by c, z, t
- save px_size in tiff
- some getters and setters in py.rs
2024-10-10 15:28:14 +02:00
Wim Pomp
7678585bba
- some more threading
2024-10-09 20:30:45 +02:00
Wim Pomp
984df9441a
- add python dependencies
2024-10-09 15:11:23 +02:00
Wim Pomp
f62b711692
- add tiffwrite function for python
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- parallel zstd compression
2024-10-09 15:07:38 +02:00
Wim Pomp
52785037b9
- can now save the common types
2024-10-09 12:05:11 +02:00
Wim Pomp
82931f7715
rewrite in rust
2024-10-06 20:30:57 +02:00
Wim Pomp
93d62c5345
- make type aliases compatible with python 3.10
2024-10-02 14:03:36 +02:00
Wim Pomp
a733d8a820
- added some type aliases
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- an overridden compress_frame in a class subclassing IJTiffWrite can now write multiple frames
2024-10-02 13:58:12 +02:00
Wim Pomp
ba73ae522a
- add null byte add end of description
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- do not raise Exception when frame 0 was not added so that the external error causing it can be debugged
2024-04-26 14:14:14 +02:00
Wim Pomp
0fc1d9e492
- mypy install fix
2024-03-27 16:12:49 +01:00
Wim Pomp
77b9e432db
- mypy workflow fix
2024-03-27 16:07:48 +01:00
Wim Pomp
a799bfae41
- mypy workflow fix
2024-03-27 16:05:59 +01:00
Wim Pomp
3652947817
- Tiffwrite is now fully typed.
2024-03-27 16:03:34 +01:00
Wim Pomp
5c6bdb264d
- Check for existence of astype.
2024-02-26 18:47:57 +01:00
Wim Pomp
0e5202bf19
- Require imagecodecs.
2024-02-14 15:02:23 +01:00
Wim Pomp
43b6a48049
- Switch to zstd compression as default.
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- Only warn if frames are missing when the file is closed, allowing the user to debug the error causing missing frames.
2024-02-14 14:54:13 +01:00
Wim Pomp
e736770512
- Use parfor to take care of the parallel part.
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- Use sha1 hash because it's consistent between processes.
2023-09-11 17:12:04 +02:00
Wim Pomp
f68afd0a1b
- Only test Python 3.10
2023-03-31 13:09:57 +02:00
Wim Pomp
332eaab6d5
- Properly define pytest as an extra dependency
2023-03-31 12:53:09 +02:00
Wim Pomp
506ee461cb
- PyTest workflow
2023-03-31 12:46:04 +02:00
