70 lines
2.1 KiB
TOML
70 lines
2.1 KiB
TOML
[package]
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name = "ndbioimage"
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version = "2026.1.1"
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edition = "2024"
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rust-version = "1.85.1"
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authors = ["Wim Pomp <w.pomp@nki.nl>"]
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license = "MIT"
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description = "Read bio image formats using the bio-formats java package."
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homepage = "https://github.com/wimpomp/ndbioimage/tree/rs"
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repository = "https://github.com/wimpomp/ndbioimage/tree/rs"
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documentation = "https://docs.rs/ndbioimage"
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readme = "README.md"
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keywords = ["bioformats", "imread", "ndarray", "metadata"]
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categories = ["multimedia::images", "science"]
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exclude = ["/tests"]
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# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html
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[lib]
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name = "ndbioimage"
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crate-type = ["cdylib", "rlib"]
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[dependencies]
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clap = { version = "4", features = ["derive"] }
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ffmpeg-sidecar = { version = "2", optional = true }
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itertools = "0.14"
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indexmap = { version = "2", features = ["serde"] }
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indicatif = { version = "0.18", features = ["rayon"], optional = true }
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j4rs = "0.24"
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ndarray = { version = "0.17", features = ["serde"] }
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num = "0.4"
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numpy = { version = "0.27", optional = true }
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ordered-float = "5"
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rayon = { version = "1", optional = true }
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serde = { version = "1", features = ["rc"] }
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serde_json = { version = "1", optional = true }
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serde_with = "3"
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tiffwrite = { version = "2025.12.0", optional = true}
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thread_local = "1"
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ome-metadata = "0.3.2"
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lazy_static = "1"
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thiserror = "2"
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[dependencies.pyo3]
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version = "0.27"
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features = ["extension-module", "abi3-py310", "generate-import-lib", "anyhow"]
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optional = true
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[dev-dependencies]
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rayon = "1"
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downloader = "0.2"
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regex = "1"
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reqwest = { version = "0.13", features = ["blocking"] }
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[build-dependencies]
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j4rs = "0.24"
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ffmpeg-sidecar = "2"
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retry = "2"
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[features]
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# Enables formats for which code in bioformats with a GPL license is needed
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gpl-formats = []
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# Enables python ffi using pyO3
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python = ["dep:pyo3", "dep:numpy", "dep:serde_json"]
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# Enables writing as tiff
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tiff = ["dep:tiffwrite", "dep:indicatif", "dep:rayon"]
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# Enables writing as mp4 using ffmpeg
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movie = ["dep:ffmpeg-sidecar"]
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[package.metadata.docs.rs]
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features = ["gpl-formats", "tiff", "movie"] |