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issfile/README.md
2023-02-23 14:29:34 +01:00

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# issfile
Library for opening [ISS](https://iss.com) files and their conversion to tiff.
## Installation
pip install issfile
## Converting .iss-pt files to .tiff files
iss2tiff --help
iss2tiff file.iss-pt
this will create file.tif and file.carpet.tif containing images and carpets respectively.
Metadata is also saved in the tiffs in the description tag. A pdf with some plots is created too.
## Use as a library
from matplotlib import pyplot as plt
from issfile import IssFile
with IssFile(file) as iss:
image = iss.get_image(c=1, t=5)
carpet, (time, x, y, z) = iss.get_carpet(c=1, t=5)
plt.figure()
plt.imshow(image)
plt.figure()
plt.plot(carpet.sum(1))