- work around a bioformats issue

py/tiffwrite/__init__.py

@@ -57,7 +57,7 @@ class IJTiffFile(rs.IJTiffFile):
 
     def __init__(
         self,
-        path: str | Path,
+        path: str | Path,  # noqa
         *,
         dtype: DTypeLike = "uint16",
         colors: Sequence[str] = None,
@@ -79,7 +79,6 @@ class IJTiffFile(rs.IJTiffFile):
         if colors is not None and colormap is not None:
             warn("Cannot have colors and colormap simultaneously.", TiffWriteWarning, stacklevel=2)
 
-        self.path = Path(path)
         self.dtype = np.dtype(dtype)
         if compression is not None:
             if isinstance(compression, tuple):
@@ -140,7 +139,7 @@ class IJTiffFile(rs.IJTiffFile):
             case np.float64:
                 self.save_f64(frame, c, z, t)
             case _:
-                raise TypeError(f"Cannot save type {self.dtype}")
+                raise TypeError(f"Cannot save type {self.dtype}")  # noqa
         if extratags is not None:
             for extra_tag in extratags:
                 self.append_extra_tag(extra_tag, (c, z, t))

py/tiffwrite/tiffwrite_rs.pyi

@@ -2,6 +2,7 @@
 # ruff: noqa: E501, F401, F403, F405
 
 import builtins
+import pathlib
 import typing
 
 import numpy
@@ -13,6 +14,8 @@ __all__ = [
 ]
 
 class IJTiffFile:
+    @property
+    def path(self) -> typing.Optional[pathlib.Path]: ...
     @property
     def colors(self) -> typing.Optional[builtins.list[builtins.list[builtins.int]]]: ...
     @colors.setter
@@ -49,16 +52,16 @@ class IJTiffFile:
         self, czt: typing.Optional[tuple[builtins.int, builtins.int, builtins.int]] = None
     ) -> builtins.list[Tag]: ...
     def close(self) -> None: ...
-    def save_f64(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
-    def save_u32(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
-    def save_u16(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
-    def save_i64(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
     def save_f32(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
+    def save_f64(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
+    def save_i64(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
+    def save_u16(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
+    def save_u32(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
     def save_u8(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
-    def save_i32(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
-    def save_u64(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
-    def save_i16(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
     def save_i8(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
+    def save_u64(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
+    def save_i32(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
+    def save_i16(self, frame: numpy.typing.ArrayLike, c: builtins.int, t: builtins.int, z: builtins.int) -> None: ...
 
 class Tag:
     @staticmethod