41658bea79
- bugfix in seqread finding images with pattern 00-Pos_000_000 - cache ome metadata - detect faulty time delta data in czi files - read ome from path.ome.xml if this file exists - add extract-ome command line option
28 lines
840 B
Python
28 lines
840 B
Python
import pickle
|
|
from multiprocessing import active_children
|
|
from pathlib import Path
|
|
|
|
import pytest
|
|
|
|
from ndbioimage import Imread, ReaderNotFoundError
|
|
|
|
|
|
@pytest.mark.parametrize('file', (Path(__file__).parent / 'files').iterdir())
|
|
def test_open(file):
|
|
try:
|
|
with Imread(file) as im:
|
|
mean = im[dict(c=0, z=0, t=0)].mean()
|
|
b = pickle.dumps(im)
|
|
jm = pickle.loads(b)
|
|
assert jm[dict(c=0, z=0, t=0)].mean() == mean
|
|
v = im.view()
|
|
assert v[dict(c=0, z=0, t=0)].mean() == mean
|
|
b = pickle.dumps(v)
|
|
w = pickle.loads(b)
|
|
assert w[dict(c=0, z=0, t=0)].mean() == mean
|
|
except ReaderNotFoundError:
|
|
assert len(Imread.__subclasses__()), 'No subclasses for Imread found.'
|
|
|
|
for child in active_children():
|
|
child.kill()
|