wim/ndbioimage
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645c75535c7b345e7a511360d8429cc19581e19b
Commit Graph
17 Commits
Author SHA1 Message Date
wim 564e59cd9f Update .gitignore
pytest / Publish (pypi.org) (push) Successful in 4m9s
Details
2026-10-30 22:09:23 +01:00
wim 1809ec859f Update .gitignore
pytest / Publish (pypi.org) (push) Successful in 4m7s
Details
2026-10-30 21:25:33 +01:00
Wim Pomp e55152c55d - use a fork of the tiff crate to open RGBPalette tiffs 2026-10-03 19:35:01 +02:00
w.pomp 6913e65420 - gitignore 2026-08-07 17:01:32 +02:00
w.pomp e4de76f26c - as_array_dyn lru caching 2026-08-04 18:29:56 +02:00
w.pomp 0ed70edd3e - small updates 2026-07-22 15:43:12 +02:00
w.pomp ff7cd562af - implement shape in Rust 
- implement more readers
- fix downloading of bioformats jar
- (mostly) compatible with python version
 2026-07-13 13:40:34 +02:00
Wim Pomp 83ea9722f6 - some workarounds to get jars and shared libs in the right place for python 
- add most ndbioimage python code and use rs code as bfread
 2025-02-16 23:03:48 +01:00
Wim Pomp 15eae99272 - do not try java things when building for docs.rs 2025-02-03 16:22:49 +01:00
Wim Pomp b612d33a35 - do not try java things when building for docs.rs 2025-02-03 16:17:14 +01:00
Wim Pomp 3c22cf743a - rename ndbioimage 2025-02-03 15:52:03 +01:00
Wim Pomp 3db6dc8ee1 - start rust rewrite 2025-02-03 15:33:32 +01:00
Wim Pomp ef6116c6bc - some ome fixes 2023-08-21 11:14:32 +02:00
Wim Pomp cf7f2b6e1e - remove list of views from base 
- fix frame_decorator in views
- use transforms and frame_decorators as cache keys
 2023-08-19 12:08:04 +02:00
Wim Pomp 0bd22d766a - fix seqread bug 2023-07-20 10:22:55 +02:00
Wim Pomp dbe80c495b - do_copy class attribute to force copy of ome 
- more ome parts optional
- reading closed file raises an error
 2023-07-11 17:20:03 +02:00
Wim Pomp 506b449f4d - read metadata into ome structure 
- pytest
- use pathlib
- series as part of the path: path/PosN
- summary only shows some available metadata
- allow dict in Imread[dict(c=c, z=z, t=t)]
- bfread in different process so the user can start another jvm
- deal with multiple images (series/positions) in czi files
- use jpype instead of javabridge/bioformats
- poetry for install
 2023-06-29 14:23:03 +02:00