10 Commits

Author SHA1 Message Date
Wim Pomp
83ea9722f6 - some workarounds to get jars and shared libs in the right place for python
- add most ndbioimage python code and use rs code as bfread
2025-02-16 23:03:48 +01:00
Wim Pomp
15eae99272 - do not try java things when building for docs.rs 2025-02-03 16:22:49 +01:00
Wim Pomp
b612d33a35 - do not try java things when building for docs.rs 2025-02-03 16:17:14 +01:00
Wim Pomp
3c22cf743a - rename ndbioimage 2025-02-03 15:52:03 +01:00
Wim Pomp
3db6dc8ee1 - start rust rewrite 2025-02-03 15:33:32 +01:00
Wim Pomp
ef6116c6bc - some ome fixes 2023-08-21 11:14:32 +02:00
Wim Pomp
cf7f2b6e1e - remove list of views from base
- fix frame_decorator in views
- use transforms and frame_decorators as cache keys
2023-08-19 12:08:04 +02:00
Wim Pomp
0bd22d766a - fix seqread bug 2023-07-20 10:22:55 +02:00
Wim Pomp
dbe80c495b - do_copy class attribute to force copy of ome
- more ome parts optional
- reading closed file raises an error
2023-07-11 17:20:03 +02:00
Wim Pomp
506b449f4d - read metadata into ome structure
- pytest
- use pathlib
- series as part of the path: path/PosN
- summary only shows some available metadata
- allow dict in Imread[dict(c=c, z=z, t=t)]
- bfread in different process so the user can start another jvm
- deal with multiple images (series/positions) in czi files
- use jpype instead of javabridge/bioformats
- poetry for install
2023-06-29 14:23:03 +02:00