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- inital transforms code

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w.pomp
2026-09-04 15:51:53 +02:00
parent 6913e65420
commit 4074770fd3
7 changed files with 90 additions and 16 deletions
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Cargo.toml
+6 -3
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@@ -19,12 +19,14 @@ name = "ndbioimage"
crate-type = ["cdylib", "rlib"]
[dependencies]
bioformats = { version = "0.1", optional = true }
clap = { version = "4", features = ["derive"] }
color-eyre = { version = "0.6", optional = true }
console = { version = "0.16", optional = true }
downloader = { version = "0.2", optional = true, default-features = false, features = ["rustls-tls"] }
ffmpeg-sidecar = { version = "2", optional = true }
itertools = "0.15"
image-registration = { path = "../image-registration", optional = true }
indexmap = { version = "2", features = ["serde"] }
indicatif = { version = "0.18", features = ["rayon"], optional = true }
j4rs = { version = "0.25", optional = true }
@@ -50,7 +52,6 @@ tiffwrite = { version = "2026.6.0", optional = true }
tokio = { version = "1", features = ["rt", "rt-multi-thread"], optional = true }
thread_local = { version = "1", optional = true }
xmltree = { version = "0.12", optional = true }
bioformats = { version = "0.1", optional = true }
[dev-dependencies]
rayon = "1"
@@ -64,7 +65,7 @@ toml = "1"
[features]
default = ["bioformats_java", "gpl-formats", "czi", "tiff", "tiffseq", "movie", "tiffwrite"]
all = ["bioformats_java", "bioformats_rust", "czi", "gpl-formats", "movie", "tiffseq", "tiffwrite", "tiff"]
all = ["bioformats_java", "bioformats_rust", "czi", "gpl-formats", "movie", "tiffseq", "tiffwrite", "tiff", "transforms"]
gpl-formats = []
python = ["dep:pyo3", "dep:numpy", "dep:color-eyre", "dep:pyo3-stub-gen", "dep:postcard", "ome-metadata/python"]
czi = ["dep:libczirw-sys", "dep:xmltree", "dep:thread_local"]
@@ -74,9 +75,11 @@ tiffwrite = ["dep:tiffwrite", "dep:indicatif", "dep:console", "dep:rayon"]
tiffseq = ["dep:tiff", "dep:serde_yaml"]
tiff = ["dep:tiff", "dep:thread_local"]
movie = ["dep:ffmpeg-sidecar", "dep:tokio", "dep:ordered-float", "dep:indicatif", "dep:console"]
transforms = ["dep:image-registration"]
[package.metadata.docs.rs]
features = ["bioformats_java", "czi", "tiff", "tiffseq", "movie", "tiffwrite", "movie"]
no-default-features = true
features = ["bioformats_java", "bioformats_rust", "czi", "movie", "tiffseq", "tiffwrite", "tiff", "transforms"]
[profile.test]
inherits = "release"