- bump bioformats to 8.3.0

- rust: command line binary, save as mp4, save as tiff, ome metadata, more methods for View, bugfixes, less unsafe code
- python: ome as dict

py/ndbioimage/ome.py

@@ -0,0 +1,39 @@
+from __future__ import annotations
+
+from ome_metadata import ome_metadata_rs as rs  # noqa
+from collections import UserDict, UserList
+
+
+class Ome(UserDict):
+    @staticmethod
+    def from_xml(xml: str) -> Ome:
+        """Create the OME structure from an XML string"""
+        new = Ome()
+        new.update(rs.ome(str(xml)))
+        return new
+
+    def __dir__(self) -> list[str]:
+        return list(self.keys()) + list(super().__dir__())
+
+    def __getattr__(self, key: str) -> Ome | OmeList | int | float | str:
+        try:
+            new = self.__getitem__(key)
+        except KeyError:
+            raise AttributeError(f"'Ome' object has no attribute '{key}'")
+        if isinstance(new, dict):
+            return Ome(**new)
+        elif isinstance(new, list):
+            return OmeList(new)
+        else:
+            return new
+
+
+class OmeList(UserList):
+    def __getitem__(self, item: int) -> Ome | OmeList | int | float | str:
+        new = super().__getitem__(item)
+        if isinstance(new, dict):
+            return Ome(**new)
+        elif isinstance(new, list):
+            return OmeList(new)
+        else:
+            return new