- Make bioformats optional because jpype can cause problems
- Ruff format
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README.md
14
README.md
@@ -13,17 +13,19 @@ Currently, it supports imagej tif files, czi files, micromanager tif sequences a
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## Installation
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One of:
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```
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pip install ndbioimage
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```
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### Installation with option to write mp4 or mkv:
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Work in progress! Make sure ffmpeg is installed.
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```
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pip install ndbioimage[bioformats]
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pip install ndbioimage[write]
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pip install ndbioimage[bioformats, write]
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```
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- bioformats: use [bio-formats](https://www.openmicroscopy.org/bio-formats/)
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as fallback when other readers cannot open a file.
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- write: write an image file into a mp4 or mkv file. Work in progress! Make sure ffmpeg is installed.
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## Usage
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### Python
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